EBC offers following programs that are accredited by Asia Theological Association (ATA), which is a member of the International Council of Accrediting Agencies of the World Evangelical Fellowship.
1. Master of Divinity (M.Div)
2. Master of Divinity (M.Div) – Distance Mode
3. Bachelor of Theology (B.Th)
4. Diploma in Theology (Dip.Th) – English
5. Diploma in Theology (Dip.Th) – Malayalam